JBLFMU-Molo, Inc. is one of the six higher education institutions (HEIs) in Region VI awarded autonomous status by the Commission on Higher Education (CHED).

The autonomous status is effective from September 16, 2024, to September 15, 2027, and underscores the Institution's unwavering commitment to delivering quality education and training.
The recognition serves as a badge of honor for JBLFMU-Molo and reinforces its reputation as a leading maritime education provider. With this autonomous status, the Institution is poised to continue its mission of nurturing well-rounded maritime professionals dedicated to contributing to the global maritime industry. The autonomous status is a significant milestone for the institution, emphasizing the dedication of its faculty and staff to fostering an environment of excellence in maritime education.